STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718015_00761Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_000718015_00762
Unannotated protein.
   
 0.997
GCA_000718015_05475
Unannotated protein.
      0.883
GCA_000718015_01741
Unannotated protein.
    
  0.623
GCA_000718015_01933
Unannotated protein.
    
  0.623
GCA_000718015_02298
Unannotated protein.
    
  0.623
GCA_000718015_02512
Unannotated protein.
       0.562
GCA_000718015_02513
Unannotated protein.
       0.562
GCA_000718015_00533
Unannotated protein.
  
   
 0.538
GCA_000718015_00763
Unannotated protein.
       0.518
GCA_000718015_01327
Unannotated protein.
  
     0.456
Your Current Organism:
Streptomyces catenulae
NCBI taxonomy Id: 66875
Other names: ATCC 12476, ATCC 23893, BCRC 12092, CBS 679.68, CCRC 12092, CCRC:12092, DSM 40258, HAMBI 986, IFO 12848, IMET 42944, ISP 5258, JCM 4353, KCTC 9223, NBRC 12848, NRRL B-2342, NRRL-ISP 5258, S. catenulae, VKM Ac-758
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.