STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718015_06053Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000718015_06052
Unannotated protein.
       0.787
GCA_000718015_05848
Unannotated protein.
  
     0.650
GCA_000718015_03550
Unannotated protein.
    
  0.626
GCA_000718015_06051
Unannotated protein.
       0.613
GCA_000718015_01932
Unannotated protein.
  
     0.592
GCA_000718015_01997
Unannotated protein.
  
     0.496
GCA_000718015_05170
Unannotated protein.
 
     0.466
GCA_000718015_05846
Unannotated protein.
  
     0.428
GCA_000718015_01921
Unannotated protein.
 
  
 0.420
GCA_000718015_01998
Unannotated protein.
  
     0.400
Your Current Organism:
Streptomyces catenulae
NCBI taxonomy Id: 66875
Other names: ATCC 12476, ATCC 23893, BCRC 12092, CBS 679.68, CCRC 12092, CCRC:12092, DSM 40258, HAMBI 986, IFO 12848, IMET 42944, ISP 5258, JCM 4353, KCTC 9223, NBRC 12848, NRRL B-2342, NRRL-ISP 5258, S. catenulae, VKM Ac-758
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.