STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017520Cysteine-rich secretory protein 2; Belongs to the CRISP family. (262 aa)    
Predicted Functional Partners:
C7M84_021572
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.795
C7M84_009155
Tetraspanin.
   
  
 0.508
C7M84_018637
Hyaluronidase.
      
 0.461
C7M84_022357
Flightless-I.
      
 0.439
C7M84_020533
Metalloendopeptidase.
   
  
 0.429
C7M84_020532
Metalloendopeptidase.
   
  
 0.429
C7M84_025420
Metalloendopeptidase.
   
  
 0.429
C7M84_007255
Putative ammonium transporter Rh type A; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.400
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.