STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015500Sortilin-related receptor. (1015 aa)    
Predicted Functional Partners:
C7M84_015499
Sortilin.
 
 
   0.930
C7M84_002684
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.902
C7M84_024851
Cation-independent mannose-6-phosphate receptor.
    
 0.900
C7M84_003896
Uncharacterized protein.
   
 0.888
C7M84_003895
Cyclin G-associated kinase.
   
 0.888
C7M84_020770
Clathrin heavy chain.
    
 0.854
C7M84_005456
Clathrin heavy chain.
    
 0.854
C7M84_021273
Putative phosphatidylinositol-binding clathrin assembly protein LAP isoform X13.
     
 0.828
C7M84_017461
A4_EXTRA domain-containing protein.
    
 0.809
C7M84_005991
Putative alpha-2-macroglobulin receptor-associated protein.
    
 
 0.747
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.