STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_011720Putative T-related protein-like. (537 aa)    
Predicted Functional Partners:
C7M84_023658
Uncharacterized protein.
      
 0.660
C7M84_022253
Protein fork head.
    
 0.605
C7M84_016323
Short gastrulation protein.
      
 0.522
C7M84_010204
Putative T-box transcription factor TBX6-like isoform X1.
  
 
 
0.496
C7M84_005872
Endothelial transcription factor GATA-2.
   
 
 0.479
C7M84_012506
Putative diencephalon/mesencephalon homeobox protein 1-B-like.
   
 
 0.447
C7M84_023435
Putative max-interacting protein 1-like.
    
  0.414
C7M84_022377
Putative Max-binding protein MNT.
    
  0.414
C7M84_015297
Uncharacterized protein.
      
 0.412
C7M84_011537
Protein big brother.
      
 0.412
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.