STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012231Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
C7M84_023832
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.913
C7M84_023833
Putative alcohol dehydrogenase class-3-like.
  
 0.913
C7M84_001022
Acetyl coenzyme A-transferase.
  
 
 0.900
C7M84_020311
SCP2 domain-containing protein.
  
 0.875
C7M84_012261
NADH dehydrogenase.
    
 0.874
C7M84_022645
Putative L-idonate 5-dehydrogenase.
  
 0.820
C7M84_017474
Uncharacterized protein.
  
 
 0.796
C7M84_021803
Putative RNA-directed DNA polymerase from mobile element jockey-like.
  
 
 0.765
C7M84_002590
Putative hydroxymethylglutaryl-CoA lyase, mitochondrial.
    
 0.694
C7M84_002563
Hydroxymethylglutaryl-CoA lyase, mitochondrial.
    
 0.694
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.