STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012224CYCLIN domain-containing protein; Belongs to the cyclin family. (456 aa)    
Predicted Functional Partners:
C7M84_018430
Uncharacterized protein.
    
  0.885
C7M84_002247
WD_REPEATS_REGION domain-containing protein.
   
 0.795
C7M84_004263
Putative PDZ domain-containing protein.
   
 0.795
C7M84_014753
Cdc20.
   
 0.795
C7M84_002248
Putative fizzy-related protein-like.
   
 0.795
C7M84_003779
Cell division cycle protein 27-like protein.
   
 0.776
C7M84_003296
Uncharacterized protein.
   
 0.769
C7M84_022683
Protein kinase domain-containing protein.
   
 0.749
C7M84_015134
Cdc2; Belongs to the protein kinase superfamily.
   
 0.749
Cdk-2
Cyclin-dependent kinases 2; Belongs to the protein kinase superfamily.
   
 0.749
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.