STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_011685Putative poly(ADP-ribose) glycohydrolase. (802 aa)    
Predicted Functional Partners:
C7M84_011317
Poly [ADP-ribose] polymerase.
  
 
 0.881
C7M84_009062
Poly [ADP-ribose] polymerase.
    
 0.851
C7M84_024872
28S ribosomal protein S27, mitochondrial.
    
   0.672
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
   0.672
C7M84_016973
Poly [ADP-ribose] polymerase.
    
 0.624
C7M84_011516
Poly [ADP-ribose] polymerase.
    
 0.624
C7M84_025404
Putative poly.
    
 0.624
C7M84_003327
Putative poly.
    
 0.624
C7M84_022546
Poly [ADP-ribose] polymerase.
    
 0.624
C7M84_016966
Poly [ADP-ribose] polymerase.
    
 0.624
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.