STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015709Putative methionine-R-sulfoxide reductase B1 isoform X1. (592 aa)    
Predicted Functional Partners:
C7M84_001356
Peptide methionine sulfoxide reductase.
 
 
 0.925
C7M84_019425
Thioredoxin; Belongs to the thioredoxin family.
   
 0.849
C7M84_002403
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.657
C7M84_020345
Putative thioredoxin, mitochondrial.
   
 0.579
C7M84_005842
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.573
C7M84_012378
Selenoprotein T.
      
 0.551
C7M84_000711
Hypoxia inducible factor 1 alpha.
      
 0.529
C7M84_000842
Uncharacterized protein.
  
  
 0.516
C7M84_021983
Putative thioredoxin domain-containing protein 3-like.
   
 0.515
C7M84_024808
Uncharacterized protein.
   
 0.515
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.