C7M84_003932 protein (Penaeus vannamei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C7M84_003932

Putative dual specificity protein kinase TTK isoform X2. (763 aa)

Predicted Functional Partners:

C7M84_021382

0.987

C7M84_002823

0.973

C7M84_019376

0.962

C7M84_011347

0.948

C7M84_008838

0.940

C7M84_004604

0.934

C7M84_016007

0.926

C7M84_017624

0.920

C7M84_015685

0.913

C7M84_004626

0.911

Your Current Organism:

Penaeus vannamei

NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7M84_002823	C7M84_003932	A0A3R7QU52	A0A3R7MAH1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative dual specificity protein kinase TTK isoform X2.	0.973
C7M84_002823	C7M84_004604	A0A3R7QU52	A0A3R7MAT4	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative condensin complex subunit 3-like.	0.940
C7M84_002823	C7M84_004626	A0A3R7QU52	A0A423TK29	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.980
C7M84_002823	C7M84_008838	A0A3R7QU52	A0A3R7MYG8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative centromere protein F-like.	0.944
C7M84_002823	C7M84_011347	A0A3R7QU52	A0A423T1M7	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.989
C7M84_002823	C7M84_015685	A0A3R7QU52	A0A423SQ07	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.916
C7M84_002823	C7M84_016007	A0A3R7QU52	A0A3R7LXR0	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.980
C7M84_002823	C7M84_017624	A0A3R7QU52	A0A3R7LU73	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cyclin A; Belongs to the cyclin family.	0.943
C7M84_002823	C7M84_019376	A0A3R7QU52	A0A3R7PE50	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	0.965
C7M84_002823	C7M84_021382	A0A3R7QU52	A0A423S9U3	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Mitotic spindle assembly checkpoint protein MAD2A.	0.960
C7M84_003932	C7M84_002823	A0A3R7MAH1	A0A3R7QU52	Putative dual specificity protein kinase TTK isoform X2.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.973
C7M84_003932	C7M84_004604	A0A3R7MAH1	A0A3R7MAT4	Putative dual specificity protein kinase TTK isoform X2.	Putative condensin complex subunit 3-like.	0.934
C7M84_003932	C7M84_004626	A0A3R7MAH1	A0A423TK29	Putative dual specificity protein kinase TTK isoform X2.	Uncharacterized protein.	0.911
C7M84_003932	C7M84_008838	A0A3R7MAH1	A0A3R7MYG8	Putative dual specificity protein kinase TTK isoform X2.	Putative centromere protein F-like.	0.940
C7M84_003932	C7M84_011347	A0A3R7MAH1	A0A423T1M7	Putative dual specificity protein kinase TTK isoform X2.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.948
C7M84_003932	C7M84_015685	A0A3R7MAH1	A0A423SQ07	Putative dual specificity protein kinase TTK isoform X2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.913
C7M84_003932	C7M84_016007	A0A3R7MAH1	A0A3R7LXR0	Putative dual specificity protein kinase TTK isoform X2.	Uncharacterized protein.	0.926
C7M84_003932	C7M84_017624	A0A3R7MAH1	A0A3R7LU73	Putative dual specificity protein kinase TTK isoform X2.	Cyclin A; Belongs to the cyclin family.	0.920
C7M84_003932	C7M84_019376	A0A3R7MAH1	A0A3R7PE50	Putative dual specificity protein kinase TTK isoform X2.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	0.962
C7M84_003932	C7M84_021382	A0A3R7MAH1	A0A423S9U3	Putative dual specificity protein kinase TTK isoform X2.	Mitotic spindle assembly checkpoint protein MAD2A.	0.987

page 1 of 6

Server load: low (30%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About