STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001856ANK_REP_REGION domain-containing protein. (826 aa)    
Predicted Functional Partners:
C7M84_016792
Protein phosphatase.
   
 0.777
C7M84_004822
Putative serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
   
 0.777
C7M84_003982
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.777
C7M84_018562
Serine/threonine-protein phosphatase.
   
 0.777
C7M84_015066
Uncharacterized protein.
   
 0.777
pps
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.777
C7M84_013725
Non-specific serine/threonine protein kinase.
    
 0.633
C7M84_014002
Putative serine/threonine-protein kinase PAK 3; Belongs to the protein kinase superfamily.
    
 0.633
C7M84_013722
Serine/threonine-protein kinase PAK 3; Belongs to the protein kinase superfamily.
    
 0.633
C7M84_016781
RhoA.
   
 0.613
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.