STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_006809Putative transmembrane protein 19 isoform X2. (262 aa)    
Predicted Functional Partners:
C7M84_017366
Netrin-1.
      
 0.580
C7M84_000127
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.569
C7M84_019103
Nogo-B receptor.
     
 0.565
C7M84_024165
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.565
C7M84_023350
SYS1-like protein.
      
 0.558
C7M84_001037
Putative differentially expressed in FDCP 6-like.
      
 0.503
C7M84_017303
Uncharacterized protein.
      
 0.478
C7M84_014505
Secretion-regulating guanine nucleotide exchange factor.
      
 0.478
C7M84_010182
Putative seipin-like.
    
   0.436
C7M84_017383
Putative D-tyrosyl-tRNA(Tyr) deacylase 2.
   
    0.432
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.