STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_025218Putative thyroid adenoma-associated protein. (2260 aa)    
Predicted Functional Partners:
C7M84_018168
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.684
C7M84_000215
Putative ribosomal RNA methyltransferase CG11447-like.
   
 
 0.663
C7M84_003411
WD repeat-containing protein 6.
   
 
 0.642
C7M84_009955
Putative serine/threonine-protein kinase Nek4-like.
   
  
 0.532
C7M84_006359
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.524
C7M84_016872
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
  
 0.503
C7M84_002627
Putative tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X2.
   
  
 0.500
C7M84_005502
Putative DNA-directed RNA polymerase I subunit RPA1.
   
    0.439
C7M84_018617
RPA_C domain-containing protein.
    
   0.434
C7M84_001996
Putative tRNA methyltransferase 112-like.
      
 0.428
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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