STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001848Clip domain serine proteinase; Belongs to the peptidase S1 family. (269 aa)    
Predicted Functional Partners:
C7M84_023953
Putative trypsin-1-like; Belongs to the peptidase S1 family.
  
 
  0.542
C7M84_016120
Putative granzyme B-like; Belongs to the peptidase S1 family.
  
 
   0.530
C7M84_013859
Putative prostasin-like; Belongs to the peptidase S1 family.
  
     0.530
C7M84_012169
Prophenoloxidase activating factor serine proteinase; Belongs to the peptidase S1 family.
  
     0.529
C7M84_023115
Granzyme B; Belongs to the peptidase S1 family.
  
 
   0.528
C7M84_023362
Transmembrane protease serine 5; Belongs to the peptidase S1 family.
  
     0.527
C7M84_023945
Putative trypsin-1; Belongs to the peptidase S1 family.
  
     0.524
C7M84_006784
Uncharacterized protein.
  
     0.523
C7M84_016762
Complement factor D; Belongs to the peptidase S1 family.
  
     0.515
C7M84_020195
Trypsin 3; Belongs to the peptidase S1 family.
  
     0.515
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.