STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015453Lactosylceramide 4-alpha-galactosyltransferase. (293 aa)    
Predicted Functional Partners:
C7M84_018330
Putative beta-1,4-galactosyltransferase 1.
     
 0.906
C7M84_015998
Putative beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform 1.
   
 
 0.905
C7M84_025458
Beta-1,4-N-acetylgalactosaminyltransferase bre-4.
   
 
 0.905
C7M84_003119
Metazoa galactosyltransferase domain containing protein.
   
 
 0.905
C7M84_015058
Beta-galactosidase.
     
  0.800
C7M84_000081
Uncharacterized protein.
     
  0.650
C7M84_004254
Beta-hexosaminidase.
     
  0.650
C7M84_017251
Beta-hexosaminidase subunit beta.
     
  0.650
C7M84_011275
Beta-hexosaminidase subunit beta.
     
  0.650
C7M84_009892
Beta-hexosaminidase subunit beta.
     
  0.650
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.