STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012612Actin T2; Belongs to the actin family. (149 aa)    
Predicted Functional Partners:
C7M84_015881
Actin T2.
 
     0.882
C7M84_012604
Actin 2.
 
     0.881
C7M84_015875
Beta-actin.
 
     0.871
C7M84_012592
Actin, muscle.
 
     0.842
C7M84_012611
Actin 2.
 
     0.827
C7M84_012607
Actin 2.
 
     0.777
C7M84_015885
Actin T2; Belongs to the actin family.
 
     0.715
C7M84_005836
Uncharacterized protein.
     
 0.675
C7M84_015888
Actin 2.
 
     0.660
C7M84_015891
Actin T2.
 
     0.616
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.