STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_003308Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (514 aa)    
Predicted Functional Partners:
C7M84_002072
Rabenosyn-5.
    
 0.945
C7M84_009769
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.863
C7M84_017096
Putative synaptosomal-associated protein 29.
    
 
 0.645
C7M84_022711
Putative ribosomal protein S23e; Belongs to the universal ribosomal protein uS12 family.
 
      0.615
C7M84_007727
Uncharacterized protein.
    
 
 0.590
C7M84_016759
Putative ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.586
C7M84_009050
Rab GTPase.
     
 0.578
C7M84_019141
Rab GTPase.
     
 0.578
C7M84_013315
Zinc transporter ZIP1.
    
 
 0.563
C7M84_003188
Putative ras-related protein Rab.
   
  
 0.548
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.