STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001068DNA polymerase epsilon subunit 3. (966 aa)    
Predicted Functional Partners:
C7M84_024534
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.996
C7M84_003412
DNA polymerase epsilon subunit 4.
    
 0.992
C7M84_004093
CBFD_NFYB_HMF domain-containing protein.
    
 0.980
C7M84_024493
DNA polymerase.
   
 0.972
C7M84_010283
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 0.964
C7M84_013181
Putative DNA polymerase epsilon subunit 2-like.
    
 0.964
C7M84_010853
DNA polymerase.
   
 0.946
C7M84_018590
Nuclear transcription factor Y subunit gamma-like.
    
 0.945
C7M84_016659
DNA polymerase.
   
 0.933
C7M84_024710
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.921
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.