STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005946Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
C7M84_016811
Glycine receptor subunit alpha-2.
  
     0.495
C7M84_023325
Uncharacterized protein.
  
     0.488
C7M84_000078
Ligand-gated ion channel 50.
  
     0.477
C7M84_005978
Pyrroline-5-carboxylate synthetase.
     
 0.461
C7M84_008655
Putative magnesium-dependent phosphatase 1-like.
   
    0.426
C7M84_007665
Glycine receptor subunit alpha-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.422
C7M84_022835
Putative PDZ domain-containing protein 11-like.
    
 0.420
C7M84_000926
Putative GABA-gated ion channel GRD isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.415
C7M84_009361
Putative glycine receptor subunit alpha-2-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.409
C7M84_002168
Nicotinic acetylcholine receptor subunit alpha 10; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.408
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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