STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_003457Putative GPI transamidase component PIG-T-like. (173 aa)    
Predicted Functional Partners:
C7M84_004518
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 0.978
C7M84_016030
Glycosylphosphatidylinositol anchor attachment 1 protein.
   
 0.978
C7M84_005428
Phosphatidylinositol glycan anchor biosynthesis class U protein.
   
 0.975
C7M84_003984
GPI transamidase component PIG-T.
 
  
  0.962
C7M84_017308
Mannosyltransferase.
    
 
 0.545
C7M84_022132
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
    
 
 0.513
C7M84_022710
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 
 0.511
C7M84_001691
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 
 0.511
C7M84_020248
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
      
 0.505
C7M84_008726
Uncharacterized protein.
    
 
 0.505
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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