STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_002808Sarcolemmal membrane-associated protein. (955 aa)    
Predicted Functional Partners:
C7M84_008339
Programmed cell death protein 10.
    
 
 0.923
C7M84_008478
Putative FGFR1 oncogene partner 2-like isoform X1.
    
 
 0.923
C7M84_010527
Putative MOB kinase activator-like 4.
    
 
 0.899
C7M84_020129
Striatin-3.
    
 
 0.840
C7M84_004014
Putative serine/threonine-protein kinase 24 isoform X3.
    
 
 0.821
C7M84_016771
Putative serine/threonine-protein phosphatase.
    
 
 0.769
C7M84_016767
Putative serine/threonine-protein phosphatase.
    
 
 0.769
C7M84_014578
Putative striatin-interacting protein 1-like.
    
 
 0.706
C7M84_003019
Uncharacterized protein.
    
 
 0.706
C7M84_008081
Putative striatin-interacting protein 2-like.
    
 
 0.706
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.