STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_018057TRC8_N domain-containing protein. (211 aa)    
Predicted Functional Partners:
C7M84_000551
Putative Katanin p60 ATPase-containing subunit.
    
 0.722
C7M84_006070
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.654
C7M84_017397
PRKCSH domain-containing protein.
   
 0.633
C7M84_025437
Putative endoplasmic reticulum lectin 1-like.
   
 0.633
C7M84_005781
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.630
C7M84_001258
Ubiquitin-like domain-containing protein.
    
  0.543
C7M84_022415
Ubiquitin/ribosomal L40 fusion protein.
    
  0.528
C7M84_016733
SAPK substrate protein.
    
 0.514
C7M84_017773
Putative peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like isoform X1.
   
 0.512
C7M84_003389
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.483
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.