STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001986Putative dehydrogenase/reductase SDR family member 4-like. (189 aa)    
Predicted Functional Partners:
C7M84_025350
Uncharacterized protein.
  
 
 0.917
C7M84_001344
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.912
C7M84_022385
O-acyltransferase.
     
 0.903
C7M84_021911
RING-type domain-containing protein.
     
 0.745
C7M84_013249
Fatty acid synthase.
  
 0.694
C7M84_025347
TPR_REGION domain-containing protein.
   
 0.692
C7M84_009208
Putative WD repeat, SAM and U-box domain-containing protein 1-like isoform X2.
    
 
 0.671
C7M84_008662
Putative peroxisome biogenesis factor 13.
   
 
  0.630
C7M84_001258
Ubiquitin-like domain-containing protein.
    
  0.622
C7M84_018550
Putative estradiol 17-beta-dehydrogenase 8 isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.598
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.