STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001929Putative kinetochore protein NDC80-like. (233 aa)    
Predicted Functional Partners:
C7M84_003087
Uncharacterized protein.
   
 0.979
C7M84_019376
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.897
C7M84_016536
Uncharacterized protein.
   
 0.886
C7M84_003932
Putative dual specificity protein kinase TTK isoform X2.
   
 
 0.876
C7M84_021382
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.843
C7M84_002995
Putative aurora kinase A.
   
 
 0.825
C7M84_025423
Cytoskeleton-associated protein 5.
    
 
 0.813
C7M84_002823
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.778
C7M84_025594
Uncharacterized protein.
   
 0.766
C7M84_011347
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.754
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.