STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_016834Rap1 GTPase-GDP dissociation stimulator 1-B. (609 aa)    
Predicted Functional Partners:
C7M84_015600
Mitochondrial Rho GTPase 1.
    
 0.694
C7M84_016781
RhoA.
    
 0.607
C7M84_008392
RhoA.
    
 0.607
C7M84_005836
Uncharacterized protein.
      
 0.578
C7M84_011863
C-myc promoter-binding protein.
      
 0.573
C7M84_016688
Putative tetratricopeptide repeat protein 23.
      
 0.546
C7M84_000760
Putative rab-like protein 3-like isoform X2.
    
 
 0.514
C7M84_009904
Putative ras-like GTP-binding protein RhoL.
    
 0.480
C7M84_009418
Cdc42-like protein.
    
 0.480
C7M84_018008
Uncharacterized protein.
    
 0.480
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.