STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017444Ephrin RBD domain-containing protein; Belongs to the ephrin family. (402 aa)    
Predicted Functional Partners:
C7M84_001221
Uncharacterized protein.
   
 0.988
C7M84_003218
Putative cytoplasmic protein NCK1 isoform X2.
    
 0.806
C7M84_011402
Putative cytoplasmic protein NCK1.
    
 0.696
C7M84_007602
Uncharacterized protein.
   
    0.689
C7M84_002626
Putative ARF GTPase-activating protein GIT2.
     
 0.661
C7M84_012496
ARF GTPase-activating protein GIT2.
     
 0.661
C7M84_016637
Rho guanine nucleotide exchange factor 7.
     
 0.611
C7M84_012127
Putative rho guanine nucleotide exchange factor 7.
     
 0.610
C7M84_017730
Tyrosine-protein kinase.
    
 0.609
C7M84_020770
Clathrin heavy chain.
     
 0.555
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.