STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_008538Putative DEP domain-containing protein 5-like isoform X1. (107 aa)    
Predicted Functional Partners:
C7M84_004232
WD repeat-containing protein mio.
   
 0.934
C7M84_012674
WD repeat-containing protein 24.
    
 0.920
C7M84_006366
Putative integrin-alpha FG-GAP repeat-containing protein 2-like isoform X1.
    
 0.915
C7M84_019210
Putative ras-related GTP-binding protein A.
    
 0.909
C7M84_005739
Uncharacterized protein.
   
 0.904
C7M84_024597
Kaptin.
    
 0.902
C7M84_022506
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.902
C7M84_017293
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.899
C7M84_004473
Uncharacterized protein.
    
 0.832
C7M84_004476
Tumor suppressor candidate 4.
    
 0.832
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.