STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_006295Putative involucrin-like. (619 aa)    
Predicted Functional Partners:
C7M84_016672
Putative RNA polymerase-associated protein LEO1.
   
 0.901
C7M84_018023
Putative FACT complex subunit spt16 isoform X2.
   
 0.824
C7M84_001432
TFIIS N-terminal domain-containing protein.
   
 0.757
C7M84_001434
Putative IWS1-like protein isoform X2.
   
 0.757
C7M84_015690
Putative transcription elongation factor SPT4.
    
 0.683
C7M84_004176
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.674
C7M84_017790
Putative DNA-directed RNA polymerase II subunit RPB3.
    
 0.673
C7M84_011270
Putative parafibromin.
   
 0.672
C7M84_023850
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.665
C7M84_013768
Putative RNA polymerase-associated protein RTF1-like.
   
 
 0.664
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.