STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_003695Putative selenoprotein O-like. (251 aa)    
Predicted Functional Partners:
C7M84_017337
Tr-type G domain-containing protein.
   
  
 0.677
C7M84_015932
Selenophosphate synthetase.
     
 0.676
C7M84_012378
Selenoprotein T.
      
 0.667
C7M84_015332
Selenoprotein M.
      
 0.613
C7M84_002774
15 kDa selenoprotein.
      
 0.600
C7M84_001356
Peptide methionine sulfoxide reductase.
     
 0.586
C7M84_005289
Selenoprotein N.
      
 0.584
C7M84_015678
Uncharacterized protein.
      
 0.563
C7M84_009448
Putative PAB-dependent poly(A)-specific ribonuclease subunit 3-like.
      
 0.563
C7M84_015709
Putative methionine-R-sulfoxide reductase B1 isoform X1.
  
  
 0.495
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.