STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001169Putative glutathione S-transferase 1, isoform D-like. (237 aa)    
Predicted Functional Partners:
C7M84_023450
Putative 60S ribosomal protein L5.
   
0.933
C7M84_020517
Bifunctional glutamate/proline--tRNA ligase.
   
 0.856
C7M84_020511
Putative glutamyl-tRNA synthetase, cytoplasmic.
   
 0.856
C7M84_017607
Ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.856
C7M84_015318
Elongation factor 1-delta protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.623
C7M84_016369
Putative elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.623
C7M84_010541
Putative DNA-directed RNA polymerases I and III subunit RPAC1-like.
   
 
 0.589
C7M84_017790
Putative DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.589
C7M84_013980
Homogentisate 1,2-dioxygenase.
  
 
 0.522
C7M84_017524
Lysine--tRNA ligase.
   
 0.516
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.