STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015083Putative heterogeneous nuclear ribonucleoprotein 27C isoform X7. (355 aa)    
Predicted Functional Partners:
C7M84_001395
Putative zinc finger CCCH domain-containing protein 14 isoform X2.
    
 
 0.840
C7M84_000056
Cleavage stimulation factor 64 kDa subunit.
  
 
0.735
C7M84_016437
RNA recognition motif (RRM).
  
 
0.703
C7M84_003220
RNA recognition motif (RRM).
  
 
0.695
C7M84_011962
Putative CUGBP Elav-like family member 4-like.
  
 
 
 0.607
C7M84_004646
Putative U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
  
 0.603
C7M84_005313
Putative ELAV-like protein 1 isoform X2.
  
 
 0.596
C7M84_016480
Putative heterogeneous nuclear ribonucleoprotein H2 isoform X2.
   
 0.592
C7M84_017091
Serine/arginine-rich splicing factor 2.
  
 
 0.575
C7M84_005641
Transportin-1.
   
 
 0.571
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.