STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012895Autophagy-related protein 2-like protein B. (418 aa)    
Predicted Functional Partners:
C7M84_012896
Putative autophagy-related protein 2-like A.
 
     0.925
C7M84_002737
Serine/threonine-protein kinase unc-51.
   
 
 0.924
C7M84_020188
Putative WD repeat domain phosphoinositide-interacting protein 2 isoform X1.
    
 
 0.894
C7M84_025533
Putative serine/threonine-protein kinase ULK3 isoform X2; Belongs to the protein kinase superfamily.
   
 
 0.840
C7M84_013721
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.693
C7M84_005110
Uncharacterized protein.
   
 
 0.585
C7M84_019065
WD repeat domain phosphoinositide-interacting protein 4.
    
 
 0.577
C7M84_007712
Uncharacterized protein.
    
 
 0.577
C7M84_014082
N_BRCA1_IG domain-containing protein.
      
 0.564
C7M84_021897
Gamma-aminobutyric acid receptor-associated protein.
   
 
 0.558
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.