STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_016640Putative isocitrate dehydrogenase. (208 aa)    
Predicted Functional Partners:
C7M84_006667
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.997
C7M84_010014
Isocitrate dehydrogenase.
  
 0.978
C7M84_023456
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.978
C7M84_004732
Iso_dh domain-containing protein.
  
0.977
C7M84_000101
Putative 2-oxoglutarate dehydrogenase, mitochondrial isoform X5.
  
 0.964
C7M84_008643
Iron regulatory protein 1-like protein.
  
 0.962
C7M84_010381
Isocitrate dehydrogenase.
 
     0.950
C7M84_003030
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
  
 
0.904
C7M84_010495
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.890
C7M84_009136
Putative aconitate hydratase, mitochondrial-like.
  
 0.878
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.