STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004096Zinc finger FYVE domain-containing protein 26. (3019 aa)    
Predicted Functional Partners:
C7M84_003425
Putative spatacsin isoform X1.
   
 
 0.801
C7M84_000138
Putative E3 ubiquitin-protein ligase TRIP12.
      
 0.678
C7M84_008436
Putative intraflagellar transport protein 80-like.
      
 0.616
C7M84_013272
S1-like domain-containing protein.
      
 0.577
C7M84_023525
Alpha-taxilin.
      
 0.570
C7M84_003896
Uncharacterized protein.
      
 0.497
C7M84_003895
Cyclin G-associated kinase.
      
 0.497
C7M84_006704
Pre-mRNA-processing factor 6.
      
 0.463
C7M84_017824
Cation-dependent mannose-6-phosphate receptor.
      
 0.456
C7M84_011801
F-box protein 7.
      
 0.445
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.