STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005628Uncharacterized protein. (711 aa)    
Predicted Functional Partners:
C7M84_025353
Integrator complex subunit 9.
    
 
 0.574
C7M84_010434
Putative golgin subfamily A member 5-like.
      
 0.572
C7M84_007506
Putative neuralized-like protein 4.
    
 
 0.471
C7M84_018740
Putative bax inhibitor 1 isoform X1; Belongs to the BI1 family.
      
 0.450
C7M84_023556
Protein Hook-like protein.
    
 0.448
C7M84_013916
CWF19-like protein 2.
      
 0.443
C7M84_009550
Mitogen-activated protein kinase-binding protein 1.
    
 
 0.431
C7M84_017010
Uncharacterized protein.
    
 
 0.427
C7M84_007637
Putative serine/threonine protein kinase IRE isoform X1.
      
 0.418
C7M84_005859
Putative EAG.
   
  
 0.416
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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