STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004279Putative ETS-likeous factor-like isoform X3. (293 aa)    
Predicted Functional Partners:
C7M84_005849
Putative retinoic acid receptor beta isoform X5.
  
 
   0.503
C7M84_021927
Putative paired box protein Pax-2a-like.
  
     0.499
C7M84_015667
Muscle-specific calpain.
  
   
 0.493
C7M84_012506
Putative diencephalon/mesencephalon homeobox protein 1-B-like.
  
     0.490
C7M84_016909
SoxB2.
  
     0.486
C7M84_009792
NK2-3/5 transcription factor.
  
 
   0.472
C7M84_025140
Putative sortilin-related receptor.
  
 
   0.461
C7M84_006267
Bone morphogenetic protein 5/8.
  
     0.451
C7M84_010674
Aristaless.
  
     0.441
C7M84_001514
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
  
     0.430
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.