STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017712Putative ubiquitin carboxyl-terminal hydrolase 28 isoform X2; Belongs to the peptidase C19 family. (1097 aa)    
Predicted Functional Partners:
C7M84_000138
Putative E3 ubiquitin-protein ligase TRIP12.
   
 
 0.920
C7M84_001258
Ubiquitin-like domain-containing protein.
   
 0.901
C7M84_022415
Ubiquitin/ribosomal L40 fusion protein.
    
 0.894
C7M84_002580
Putative polyubiquitin-B isoform X1.
   
 0.841
C7M84_011877
Putative claspin.
    
 0.840
C7M84_012369
Ubiquitinyl hydrolase 1.
   
 
 0.836
C7M84_001656
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
   
0.777
C7M84_013237
Putative tumor suppressor p53-binding protein 1 isoform X1.
   
 
 0.737
C7M84_005151
Uncharacterized protein.
    
 0.715
C7M84_024486
Histone H2A deubiquitinase MYSM1.
   
 
 0.689
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.