STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_009463Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
C7M84_003262
Chromatin modification-related protein MEAF6.
    
 0.705
C7M84_008702
Putative transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.615
C7M84_005141
Uncharacterized protein.
   
 0.566
C7M84_016633
Putative male-specific lethal 3-like isoform X2.
   
 0.509
C7M84_022005
Putative transcription initiation factor tfii-D.
    
 0.502
C7M84_011512
Putative histone-binding protein Caf1 isoform X4.
   
 0.498
C7M84_009045
Putative Bromodomain and PHD finger-containing protein.
    
 0.486
C7M84_009044
Putative peregrin-like isoform X2.
    
 0.486
C7M84_003527
Putative histone acetyltransferase Tip60 isoform X2.
    
 0.461
C7M84_000915
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.461
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.