STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_009047Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)    
Predicted Functional Partners:
C7M84_025350
Uncharacterized protein.
    
 0.916
C7M84_001344
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
  0.912
C7M84_022385
O-acyltransferase.
   
 
 0.911
C7M84_020970
TF_AP-2 domain-containing protein.
    
 0.860
C7M84_022322
Receptor protein-tyrosine kinase.
    
 0.736
C7M84_018532
Putative epidermal growth factor receptor isoform X1.
    
 0.736
C7M84_022321
Epidermal growth factor receptor.
    
 0.736
C7M84_023170
Uncharacterized protein.
    
 
 0.596
C7M84_020311
SCP2 domain-containing protein.
  
 0.571
C7M84_024368
C-Jun protein.
      
 0.548
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.