STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_008725Leucine-rich repeat protein. (536 aa)    
Predicted Functional Partners:
C7M84_024753
Putative latrophilin Cirl-like isoform X7; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.779
C7M84_007157
Putative latrophilin-3-like.
    
   0.779
C7M84_005286
Putative latrophilin Cirl-like isoform X4; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.779
C7M84_003807
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.779
C7M84_023282
Calcium homeostasis endoplasmic reticulum protein.
    
  0.539
C7M84_012976
Vang-like protein 1.
    
 0.501
C7M84_020954
Zinc finger protein.
      
 0.478
C7M84_014089
Putative GTP-binding protein Rit1.
    
 0.452
C7M84_008182
Putative ras-like protein 2 isoform X1.
    
 0.452
C7M84_005278
Uncharacterized protein.
    
 0.452
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.