STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005219DmX-like protein 2. (265 aa)    
Predicted Functional Partners:
C7M84_013004
Rogdi protein.
    
 
 0.949
C7M84_010148
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.921
C7M84_013013
Uncharacterized protein.
    
 
 0.873
C7M84_017770
H+ ATPase.
    
 
 0.848
C7M84_017243
Vacuolar ATP synthase subunit B K form.
    
 
 0.848
C7M84_021930
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.772
C7M84_015728
Putative WD repeat-containing protein 7 isoform X4.
   
 
 0.588
C7M84_022602
Putative WD repeat-containing protein 7 isoform X3.
   
 
 0.588
C7M84_024581
V-ATPase A.
    
 
 0.574
C7M84_006833
Putative rab3 GTPase-activating protein catalytic subunit isoform 1.
   
 
 0.556
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.