STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015237Putative hyphally regulated cell wall protein 3. (791 aa)    
Predicted Functional Partners:
C7M84_017294
Putative anti-silencing protein.
   
 
 0.738
C7M84_025013
Structural maintenance of chromosomes protein.
   
 
 0.732
C7M84_023786
Putative methenyltetrahydrofolate synthase domain-containing protein-like isoform X2.
   
    0.724
C7M84_003737
Putative rho guanine nucleotide exchange factor 12 isoform X3.
   
    0.723
C7M84_003411
WD repeat-containing protein 6.
   
    0.723
C7M84_022084
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.656
C7M84_018221
Non-specific serine/threonine protein kinase.
   
   0.656
C7M84_001720
WD_REPEATS_REGION domain-containing protein.
   
    0.643
C7M84_020505
Monocyte to macrophage differentiation factor 2.
   
    0.636
C7M84_003736
PDZ domain-containing protein.
   
    0.610
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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