STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_021867Putative PTB domain-containing adapter protein ced-6-like. (439 aa)    
Predicted Functional Partners:
C7M84_005836
Uncharacterized protein.
    
 0.878
C7M84_009192
WD_REPEATS_REGION domain-containing protein.
      
 0.659
C7M84_014157
Uncharacterized protein.
      
 0.632
C7M84_017461
A4_EXTRA domain-containing protein.
    
 
 0.575
C7M84_005001
Putative fasciculation and elongation protein zeta-2.
      
 0.568
C7M84_005664
Haloalkane dehalogenase.
   
  
 0.564
C7M84_003530
Putative multiple epidermal growth factor-like domains protein 6 isoform X6.
   
 
 0.559
C7M84_001941
Putative multiple epidermal growth factor-like domains protein 10 isoform X1.
   
 
 0.559
C7M84_018448
Uncharacterized protein.
   
 
 0.559
C7M84_017593
Putative bifunctional arginine demethylase and lysyl-hydroxylase PSR isoform X1.
      
 0.550
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.