STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_021344Putative neuronal pentraxin-2. (728 aa)    
Predicted Functional Partners:
C7M84_016622
Putative E3 ubiquitin-protein ligase RING1.
    
 0.926
C7M84_018921
Extra sex comb.
    
 0.638
C7M84_008348
Putative COMM domain-containing protein 3.
    
 0.626
C7M84_018643
RAWUL domain-containing protein.
    
 0.626
C7M84_000029
RING-type domain-containing protein.
    
 0.626
C7M84_002986
Putative polycomb group RING finger protein 3.
    
 0.626
C7M84_007418
Putative histone-lysine N-methyltransferase E(Z) isoform X2.
    
 0.577
C7M84_007808
Putative enhancer of zeste, ezh.
    
 0.577
C7M84_025554
Putative polycomb protein Suz12.
     
 0.570
C7M84_011512
Putative histone-binding protein Caf1 isoform X4.
    
 0.543
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.