STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_018717TOM1-like protein 2. (426 aa)    
Predicted Functional Partners:
C7M84_004924
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.812
C7M84_005682
Putative myosin heavy chain 95F isoform X2.
    
 
 0.812
C7M84_016759
Putative ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.797
C7M84_001258
Ubiquitin-like domain-containing protein.
    
   0.744
C7M84_012524
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
 
      0.744
C7M84_018344
Putative rab5 GDP/GTP exchange factor-like isoform X1.
     
 0.721
C7M84_022415
Ubiquitin/ribosomal L40 fusion protein.
    
   0.672
C7M84_019283
Putative rab GTPase-binding effector protein 1-like isoform X3.
    
 0.665
C7M84_017045
Putative myosin-IB isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.648
C7M84_024851
Cation-independent mannose-6-phosphate receptor.
    
 
 0.591
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.