STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_018514Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (209 aa)    
Predicted Functional Partners:
C7M84_015133
Putative male-specific lethal 1-like.
    
 0.875
C7M84_023096
Putative PHD finger protein 20 isoform X7.
   
 0.870
C7M84_013244
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
   
 0.846
C7M84_016633
Putative male-specific lethal 3-like isoform X2.
    
 0.825
C7M84_005141
Uncharacterized protein.
   
 0.812
C7M84_008702
Putative transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.798
C7M84_003262
Chromatin modification-related protein MEAF6.
    
 0.794
C7M84_012868
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.758
C7M84_025034
Dosage compensation regulator.
    
 
 0.728
C7M84_021177
Inhibitor of growth protein 3.
    
 0.716
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.