STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017846WD_REPEATS_REGION domain-containing protein. (336 aa)    
Predicted Functional Partners:
C7M84_013843
Uncharacterized protein.
    
 0.772
C7M84_021382
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.668
C7M84_008572
Putative intraflagellar transport protein 57-like.
    
 0.662
C7M84_019376
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.641
C7M84_018399
Mitotic checkpoint protein.
   
 0.598
C7M84_016535
Putative mitotic spindle assembly checkpoint protein MAD1-like.
    
 0.597
C7M84_015064
Tubulin domain-containing protein.
    
 0.594
C7M84_025450
Uncharacterized protein.
    
 0.594
C7M84_020723
Tubulin beta-2 chain; Belongs to the tubulin family.
    
 0.594
C7M84_013384
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.594
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.