STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017251Beta-hexosaminidase subunit beta. (472 aa)    
Predicted Functional Partners:
C7M84_015058
Beta-galactosidase.
  
 
 0.921
C7M84_008819
Alpha-galactosidase.
   
 
 0.915
C7M84_000081
Uncharacterized protein.
  
  
 
0.915
C7M84_017177
Alpha-galactosidase.
   
 
 0.915
C7M84_004254
Beta-hexosaminidase.
  
  
 
0.914
C7M84_002983
Sulfatase domain-containing protein.
   
 0.909
C7M84_011493
Putative hexosaminidase D-like isoform X1.
     
 0.909
C7M84_017972
Hexosaminidase domain-containing protein.
     
 0.909
C7M84_017176
Hexosaminidase domain-containing protein.
     
 0.909
C7M84_004129
BcrAD_BadFG domain-containing protein.
    
  0.907
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.