STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017076Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (312 aa)    
Predicted Functional Partners:
C7M84_016811
Glycine receptor subunit alpha-2.
  
  
  0.529
C7M84_024377
Putative acetylcholine receptor subunit alpha-type acr-16-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.526
C7M84_003846
Putative gamma-aminobutyric-acid receptor alpha-2 subunit.
  
  
  0.519
C7M84_009057
Nicotinic acetylcholine receptor subunit alpha 12.
  
     0.507
C7M84_001610
Nicotinic acetylcholine receptor alpha 10 subunit.
  
     0.494
C7M84_022753
Putative neuronal acetylcholine receptor subunit alpha-7-like.
  
     0.491
C7M84_001668
Nicotinic acetylcholine receptor subunit alpha 8; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.452
C7M84_005790
Nicotinic acetylcholine receptor Paa7 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.448
C7M84_002168
Nicotinic acetylcholine receptor subunit alpha 10; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.423
C7M84_009935
Nicotinic acetylcholine receptor subunit beta 1.
  
     0.402
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.