STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_016450Uncharacterized protein K02A2.6-like. (395 aa)    
Predicted Functional Partners:
C7M84_015930
Integrase catalytic domain-containing protein.
  
  
  0.486
C7M84_018267
Gag pol polyprotein.
  
  
 
0.457
C7M84_017541
Integrase catalytic domain-containing protein.
  
  
 
0.453
C7M84_021478
Reverse transcriptase domain-containing protein.
  
  
 
0.445
C7M84_000959
Transposon Ty3-G Gag-Pol polyprotein.
  
  
 
0.445
C7M84_008508
Transposon Ty3-G gap-Pol polyprotein.
  
  
 
0.421
C7M84_017805
Gag-pol polyprotein.
  
     0.418
C7M84_008228
Putative choline/ethanolamine kinase.
  
  
 
0.412
C7M84_017745
Reverse transcriptase.
  
  
 
0.409
C7M84_023916
Uncharacterized protein.
  
  
 
0.407
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.